Community Academic Profiles

Department: Stanford Cancer Institute

Division: Molecular Profiling

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  • Academic Appointments Professor,  Pathology
    Member,  Stanford Cancer Institute
    Member,  Bio-X
    Professor,  Microbiology & Immunology
    Professor (By courtesy),  Chemical and Systems Biology
    Research Interest

    Our lab uses chemical, biochemical, and cell biological methods to study protease function in human disease. Projects include: 1) Design and synthesis of novel chemical probes for each of the primary protease families. 2) Understanding the role of proteolysis in the life cycle of the human parasites, Plasmodium falciparum and Toxoplasma gondii. 3) Defining the specific functional roles of proteases during the process of tumorogenesis. 4) In vivo imaging of protease activity

  • Academic Appointments Professor,  Urology
    Member,  Stanford Cancer Institute
    Member,  Bio-X
    Clinical Focus
    • Cancer  >  Urologic Oncology
    • Male Cancers - Prostate
    • Prostate Cancer
    Research Interest

    We use genomic approaches to identify disease biomarkers. We are most interested in translating biomarkers into clinical practice in urological diseases with a particular focus in cancer.

  • Academic Appointments Professor,  Biochemistry
    Member,  Stanford Cancer Institute
    Research Interest

    Dr. Brown's research group uses diverse experimental and computational methods to investigate the logic and mechanisms that control a genome's expression program. The Brown laboratory is systematically characterizing the genetic scripts that control the expression of our genes, in normal development and physiology and in diseases like cancer, with a particular focus on post-transcriptional regulation. The Brown lab also develops strategies and assays for early detection and diagnosis of cancer.

  • Academic Appointments Professor,  Dermatology
    Member,  Stanford Cancer Institute
    Member,  Bio-X
    Clinical Focus
    • Cancer  >  Cutaneous (Dermatologic) Oncology
    • Dermatology
    • General Dermatology
    Research Interest

    Our research is focused on how the activities of hundreds or even thousands of genes (gene parties) are coordinated to achieve biological meaning. We have pioneered methods to predict, dissect, and control large-scale gene regulatory programs; these methods have provided insights into human development, cancer, and aging.

  • Academic Appointments Professor,  Medicine - Oncology
    Member,  Stanford Cancer Institute
    Member,  Bio-X
    Professor,  Biochemistry
    Clinical Focus
    • Cancer  >  GI Oncology
    • Oncology
    Research Interest

    Our laboratory focuses on understanding how cells respond to DNA damage. Our research currently involves areas that interact with each other: repair of radiation damage, and transcriptional responses to DNA damage.

  • Academic Appointments Professor - Med Center Line,  Pediatrics - Hematology & Oncology
    Member,  Stanford Cancer Institute
    Member,  Child Health Research Institute
    Clinical Focus
    • Pediatric Hematology-Oncology
    • Ped Hematology/Oncology
    Research Interest

    Hematology/Oncology, Phase I drug studies for childhood cancer, overcoming multidrug resistance in leukemia and solid tumors, biology and treatment of acute nonlymphocytic leukemia, early detection of central nervous system leukemia by measuring growth, factor binding proteins.

  • Research Interest

    Theories of inference applied to biostatistical data;, the bootstrap method.

  • Academic Appointments Associate Professor,  Biochemistry
    Member,  Stanford Cancer Institute
    Member,  Bio-X
    Research Interest

    Our lab engineers proteins and small-molecule drugs at atomic resolution through a combination of structural calculations and combinatorial library synthesis. Our goal is to elucidate predictive principles by which novel shapes and catalytic properties can be conferred accurately on designed polypeptides.

  • Research Interest

    Flexible statistical modelling, datamining, bioinformatics, and statistical computing.

  • Academic Appointments Professor,  Biochemistry
    Member,  Bio-X
    Member,  Stanford Cancer Institute
    Professor (By courtesy),  Natural Sciences Cluster - Chemistry
    Professor (By courtesy),  Chemical Engineering
    Research Interest

    Our research is aimed at understanding the chemical and physical behavior underlying biological macromolecules and systems, as these behaviors define the capabilities and limitations of biology. Toward this end we study folding and catalysis by RNA, as well as catalysis by protein enzymes.

  • Academic Appointments Professor - Med Center Line,  Surgery - General Surgery
    Member,  Bio-X
    Member,  Stanford Cancer Institute
    Clinical Focus
    • Cancer  >  Breast Cancer
    • General Surgery
    Research Interest

    Dr. Jeffrey was team leader of the multidisciplinary team from the School of Medicine, School of Engineering, and Genome Technology Center that invented the MagSweeper automated technology to isolate live circulating tumor cells (CTCs) from cancer patient blood for single cell analysis. Her lab characterizes CTCs in different cancers, investigating CTC profiles and mutations as potential companion diagnostics to define individual patient response to newer biologically-based cancer therapies.

  • Academic Appointments Professor - Med Center Line,  Pathology
    Member,  Stanford Cancer Institute
    Clinical Focus
    • Anatomic/Clinical Pathology
    • Pathology and Laboratory Medicine
    Research Interest

    Gynecological, breast and gastrointestinal pathology with major emphasis on ovarian cancer and ovarian tumors of low malignant potential. Pathology of familial and hereditary breast-ovarian-GI cancer.

  • Academic Appointments Associate Professor,  Medicine - Gastroenterology & Hepatology
    Member,  Stanford Cancer Institute
    Associate Professor (By courtesy),  Molecular & Cellular Physiology
    Clinical Focus
    • Gastroenterology
    Research Interest

    Pancreatic and esophageal cancers are common and deadly cancers of the gastrointestinal tract. Our laboratory is currently focused on the characterization of genes important in tumor development and growth. Such genes will potentially serve as therapeutic targets. An additional focus of the laboratory is the development of diagnostic assays for the early detection of pancreatic and esophageal disease.

  • Academic Appointments Assistant Professor - Med Center Line,  Medicine - Hematology
    Member,  Stanford Cancer Institute
    Clinical Focus
    • Cancer  >  Hematology
    • Hematology
    • Acute leukemia
    Research Interest

    My clinical activities combine the development of novel therapeutic modalities, translational research activities and epidemiological study of acute leukemia. My special focus is on the development of better, patient tailored therapies for young and elderly patients with acute leukemia.

  • Academic Appointments Assistant Professor - Med Center Line,  Medicine - Oncology
    Member,  Stanford Cancer Institute
    Clinical Focus
    • Cancer  >  Thoracic Oncology
    • Thoracic Oncology
    • Lung Cancer
    Research Interest

    Applying new technologies to the diagnosis, characterization, and treatment of non-small cell lung cancer.

  • Academic Appointments Associate Professor,  Pathology
    Member,  Bio-X
    Member,  Stanford Cancer Institute
    Research Interest

    Our laboratory uses genomic approaches to explore patterns of gene expression and gene copy number alteration in human cancer cell line model systems and in tumors, with the goals of better understanding cancer, and developing novel diagnostic and therapeutic strategies.

  • Academic Appointments Professor,  Medicine - Infectious Diseases
    Member,  Bio-X
    Member,  Stanford Cancer Institute
    Professor,  Microbiology & Immunology
    Clinical Focus
    • Infectious Disease
    Research Interest

    My investigative program focuses on human-microbe interactions and human microbial ecology, and primarily concerns the ecology of human indigenous microbial communities; a secondary interest concerns the classification of humans with systemic infectious diseases, based on features of genome-wide gene transcript abundance patterns and pther aspects of the host response.

  • Academic Appointments Professor - Med Center Line,  Medicine - Cardiovascular Medicine
    Member,  Stanford Cancer Institute
    Clinical Focus
    • Lymphatic Diseases
    • Cardiology (Heart)
    • Cardiology (Heart), Preventive
    Research Interest

    My clinical research includes studies on risk factor modification in atherosclerosis and coronary artery disease; clinical trials involving medical therapies for peripheral arterial insufficiency; coronary angiogenesis; therapy of lymphedema; atherand photodynamic therapy in atherosclerosis.

  • Academic Appointments Associate Professor,  Genetics
    Member,  Stanford Cancer Institute
    Research Interest

    Evolution and the adaptive landscape using yeast as a model; Defining yeast transcriptomes; chromosomal evolution in hybrid yeast species

  • Academic Appointments Professor,  Biochemistry
    Member,  Stanford Cancer Institute
    Member,  Bio-X
    Research Interest

    The general research interest of this laboratory is the molecular basis of cell motility. We have three specific research interests, the molecular basis of energy transduction that leads to ATP-driven myosin movement on actin, the biochemical basis of the regulation of actin and myosin interaction and their assembly states, and the roles these proteins play in vivo, in cell movement and changes in cell shape.

  • Research Interest

    My research is in applied statistics and biostatistics. I specialize in computer-intensive methods for regression and classification, bootstrap, cross-validation and statistical inference, and signal and image analysis for medical diagnosis.

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